WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D3.9.1 Sequence Name  R05D3.9.1
Length (nt)  2045   Chromosome Location  III: 8362408-8368719
Chromosome . Primary Identifier  III Chromosome Location . Start  8362408
Chromosome Location . End  8368719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019882 R05D3.9 R05D3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D3.9 R05D3.9 1941   III: 8362484-8362588

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05D3.9.1 8362408 8368719 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97726   181   III: 8362408-8362588 Caenorhabditis elegans
Exon97727   122   III: 8362638-8362759 Caenorhabditis elegans
Exon97728   325   III: 8362852-8363176 Caenorhabditis elegans
Exon97729   121   III: 8363219-8363339 Caenorhabditis elegans
Exon97730   201   III: 8363976-8364176 Caenorhabditis elegans
Exon97733   160   III: 8364225-8364384 Caenorhabditis elegans
Exon97736   69   III: 8364432-8364500 Caenorhabditis elegans
Exon97758   211   III: 8366525-8366735 Caenorhabditis elegans
Exon97759   103   III: 8366789-8366891 Caenorhabditis elegans
Exon97760   81   III: 8367309-8367389 Caenorhabditis elegans
Exon97761   86   III: 8367436-8367521 Caenorhabditis elegans
Exon97762   98   III: 8367568-8367665 Caenorhabditis elegans
Exon97763   88   III: 8367784-8367871 Caenorhabditis elegans
Exon97764   88   III: 8367920-8368007 Caenorhabditis elegans
Exon97765   111   III: 8368609-8368719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05D3.9.1 8362408 8368719 -1

1 Sequence

Length
2045

1 Sequence Ontology Term

Identifier Name Description
transcript