WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK353.1a.1 Sequence Name  ZK353.1a.1
Length (nt)  1699   Chromosome Location  III: 8405874-8409399
Chromosome . Primary Identifier  III Chromosome Location . Start  8405874
Chromosome Location . End  8409399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK353.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022697 cyy-1 ZK353.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK353.1a ZK353.1a 1068   III: 8406008-8406106

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK353.1a.1 8405874 8409399 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97866   69   III: 8405874-8405942 Caenorhabditis elegans
Exon97867   102   III: 8406005-8406106 Caenorhabditis elegans
Exon97870   79   III: 8406372-8406450 Caenorhabditis elegans
Exon97871   75   III: 8406498-8406572 Caenorhabditis elegans
Exon97873   117   III: 8406622-8406738 Caenorhabditis elegans
Exon97875   143   III: 8406784-8406926 Caenorhabditis elegans
Exon97877   120   III: 8406981-8407100 Caenorhabditis elegans
Exon97879   167   III: 8407780-8407946 Caenorhabditis elegans
Exon97881   163   III: 8407997-8408159 Caenorhabditis elegans
Exon97883   664   III: 8408736-8409399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK353.1a.1 8405874 8409399 1

1 Sequence

Length
1699

1 Sequence Ontology Term

Identifier Name Description
transcript