WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42H10.3a.1 Sequence Name  F42H10.3a.1
Length (nt)  1256   Chromosome Location  III: 8484153-8488365
Chromosome . Primary Identifier  III Chromosome Location . Start  8484153
Chromosome Location . End  8488365 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42H10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018367 F42H10.3 F42H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42H10.3a F42H10.3a 1008   III: 8484158-8484327

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42H10.3a.1 8484153 8488365 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98004   175   III: 8484153-8484327 Caenorhabditis elegans
Exon98005   85   III: 8484378-8484462 Caenorhabditis elegans
Exon98007   93   III: 8484987-8485079 Caenorhabditis elegans
Exon98009   97   III: 8485127-8485223 Caenorhabditis elegans
Exon98011   99   III: 8486643-8486741 Caenorhabditis elegans
Exon98013   114   III: 8487407-8487520 Caenorhabditis elegans
Exon98015   194   III: 8487700-8487893 Caenorhabditis elegans
Exon98017   399   III: 8487967-8488365 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42H10.3a.1 8484153 8488365 1

1 Sequence

Length
1256

1 Sequence Ontology Term

Identifier Name Description
transcript