WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02D5.1.1 Sequence Name  C02D5.1.1
Length (nt)  1330   Chromosome Location  III: 8561136-8563026
Chromosome . Primary Identifier  III Chromosome Location . Start  8561136
Chromosome Location . End  8563026 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02D5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015335 acdh-6 C02D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02D5.1 C02D5.1 1227   III: 8561185-8561419

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02D5.1.1 8561136 8563026 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98229   284   III: 8561136-8561419 Caenorhabditis elegans
Exon98230   135   III: 8561472-8561606 Caenorhabditis elegans
Exon98231   353   III: 8561651-8562003 Caenorhabditis elegans
Exon98232   354   III: 8562088-8562441 Caenorhabditis elegans
Exon98233   204   III: 8562823-8563026 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02D5.1.1 8561136 8563026 1

1 Sequence

Length
1330

1 Sequence Ontology Term

Identifier Name Description
transcript