WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06E1.4.1 Sequence Name  C06E1.4.1
Length (nt)  3009   Chromosome Location  III: 8584163-8588642
Chromosome . Primary Identifier  III Chromosome Location . Start  8584163
Chromosome Location . End  8588642 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001612 glr-1 C06E1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06E1.4 C06E1.4 2889   III: 8584256-8584342

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06E1.4.1 8584163 8588642 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98253   180   III: 8584163-8584342 Caenorhabditis elegans
Exon98255   105   III: 8584491-8584595 Caenorhabditis elegans
Exon98256   332   III: 8584638-8584969 Caenorhabditis elegans
Exon98257   190   III: 8585072-8585261 Caenorhabditis elegans
Exon98258   199   III: 8585305-8585503 Caenorhabditis elegans
Exon98259   164   III: 8585738-8585901 Caenorhabditis elegans
Exon98260   255   III: 8585951-8586205 Caenorhabditis elegans
Exon98261   405   III: 8586251-8586655 Caenorhabditis elegans
Exon98262   95   III: 8586703-8586797 Caenorhabditis elegans
Exon98263   280   III: 8586848-8587127 Caenorhabditis elegans
Exon98264   257   III: 8587416-8587672 Caenorhabditis elegans
Exon98265   326   III: 8587720-8588045 Caenorhabditis elegans
Exon98266   97   III: 8588169-8588265 Caenorhabditis elegans
Exon98267   124   III: 8588519-8588642 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06E1.4.1 8584163 8588642 -1

1 Sequence

Length
3009

1 Sequence Ontology Term

Identifier Name Description
transcript