WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00195577 Gene Name  C06E1.12
Sequence Name  ? C06E1.12 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position  :±
Length (nt)  ? 148
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00195577

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06E1.12 C06E1.12 148   III: 8588915-8589062
 

Other

0 CDSs

0 RNAi Result

5 Allele

Public Name
gk964518
gk963887
gk963915
gk963916
WBVar02010633

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00195577 8588915 8589062 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIII_8589063..8589335   273 III: 8589063-8589335 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in dissected female germline comparing to in dissected male germline. Log2 Fold change > 2 or <-1, p-value < 0.05. WBPaper00053599:female_vs_male_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00195577 8588915 8589062 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
148

1 Sequence Ontology Term