WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13G5.1.1 Sequence Name  C13G5.1.1
Length (nt)  900   Chromosome Location  III: 8622735-8626298
Chromosome . Primary Identifier  III Chromosome Location . Start  8622735
Chromosome Location . End  8626298 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13G5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000439 ceh-16 C13G5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13G5.1 C13G5.1 564   III: 8622888-8623083

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13G5.1.1 8622735 8626298 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98319   36   III: 8622735-8622770 Caenorhabditis elegans
Exon98321   198   III: 8622886-8623083 Caenorhabditis elegans
Exon98322   133   III: 8623401-8623533 Caenorhabditis elegans
Exon98324   79   III: 8623680-8623758 Caenorhabditis elegans
Exon98326   454   III: 8625845-8626298 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13G5.1.1 8622735 8626298 1

1 Sequence

Length
900

1 Sequence Ontology Term

Identifier Name Description
transcript