WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22B7.10.1 Sequence Name  F22B7.10.1
Length (nt)  2155   Chromosome Location  III: 8659872-8667482
Chromosome . Primary Identifier  III Chromosome Location . Start  8659872
Chromosome Location . End  8667482 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22B7.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001078 dpy-19 F22B7.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22B7.10 F22B7.10 2052   III: 8659968-8660139

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22B7.10.1 8659872 8667482 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98402   268   III: 8659872-8660139 Caenorhabditis elegans
Exon98403   129   III: 8660190-8660318 Caenorhabditis elegans
Exon98404   100   III: 8660367-8660466 Caenorhabditis elegans
Exon98405   99   III: 8660561-8660659 Caenorhabditis elegans
Exon98406   199   III: 8660706-8660904 Caenorhabditis elegans
Exon98407   234   III: 8661089-8661322 Caenorhabditis elegans
Exon98408   138   III: 8661369-8661506 Caenorhabditis elegans
Exon98409   265   III: 8661628-8661892 Caenorhabditis elegans
Exon98410   150   III: 8661984-8662133 Caenorhabditis elegans
Exon98411   212   III: 8662182-8662393 Caenorhabditis elegans
Exon98413   138   III: 8662537-8662674 Caenorhabditis elegans
Exon98414   113   III: 8662723-8662835 Caenorhabditis elegans
Exon98422   110   III: 8667373-8667482 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22B7.10.1 8659872 8667482 -1

1 Sequence

Length
2155

1 Sequence Ontology Term

Identifier Name Description
transcript