WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0523.5.1 Sequence Name  B0523.5.1
Length (nt)  4615   Chromosome Location  III: 8675297-8683736
Chromosome . Primary Identifier  III Chromosome Location . Start  8675297
Chromosome Location . End  8683736 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0523.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001443 fli-1 B0523.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0523.5 B0523.5 3774   III: 8676095-8676109

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0523.5.1 8675297 8683736 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98451   813   III: 8675297-8676109 Caenorhabditis elegans
Exon98452   234   III: 8676225-8676458 Caenorhabditis elegans
Exon98453   352   III: 8676736-8677087 Caenorhabditis elegans
Exon98454   182   III: 8677248-8677429 Caenorhabditis elegans
Exon98455   963   III: 8677478-8678440 Caenorhabditis elegans
Exon98458   675   III: 8678902-8679576 Caenorhabditis elegans
Exon98459   153   III: 8680189-8680341 Caenorhabditis elegans
Exon98460   88   III: 8681692-8681779 Caenorhabditis elegans
Exon98461   437   III: 8682389-8682825 Caenorhabditis elegans
Exon98462   91   III: 8682874-8682964 Caenorhabditis elegans
Exon98463   317   III: 8683008-8683324 Caenorhabditis elegans
Exon98464   207   III: 8683379-8683585 Caenorhabditis elegans
Exon98465   103   III: 8683634-8683736 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0523.5.1 8675297 8683736 -1

1 Sequence

Length
4615

1 Sequence Ontology Term

Identifier Name Description
transcript