WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0303.9.1 Sequence Name  B0303.9.1
Length (nt)  2026   Chromosome Location  III: 8700927-8703341
Chromosome . Primary Identifier  III Chromosome Location . Start  8700927
Chromosome Location . End  8703341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0303.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015130 vps-33.1 B0303.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0303.9 B0303.9 1812   III: 8700927-8700983

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0303.9.1 8700927 8703341 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98519   57   III: 8700927-8700983 Caenorhabditis elegans
Exon98520   123   III: 8701040-8701162 Caenorhabditis elegans
Exon98521   162   III: 8701220-8701381 Caenorhabditis elegans
Exon98522   81   III: 8701427-8701507 Caenorhabditis elegans
Exon98523   98   III: 8701554-8701651 Caenorhabditis elegans
Exon98524   511   III: 8701745-8702255 Caenorhabditis elegans
Exon98525   163   III: 8702302-8702464 Caenorhabditis elegans
Exon98526   831   III: 8702511-8703341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0303.9.1 8700927 8703341 1

1 Sequence

Length
2026

1 Sequence Ontology Term

Identifier Name Description
transcript