WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:PAR2.3b.1 Sequence Name  PAR2.3b.1
Length (nt)  2336   Chromosome Location  III: 8756990-8761089
Chromosome . Primary Identifier  III Chromosome Location . Start  8756990
Chromosome Location . End  8761089 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
PAR2.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019801 aak-1 PAR2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PAR2.3b PAR2.3b 1257   III: 8757236-8757361

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:PAR2.3b.1 8756990 8761089 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98726   372   III: 8756990-8757361 Caenorhabditis elegans
Exon98729   89   III: 8757419-8757507 Caenorhabditis elegans
Exon98731   135   III: 8757983-8758117 Caenorhabditis elegans
Exon98733   300   III: 8758465-8758764 Caenorhabditis elegans
Exon98735   205   III: 8758813-8759017 Caenorhabditis elegans
Exon98737   209   III: 8759445-8759653 Caenorhabditis elegans
Exon98739   867   III: 8759702-8760568 Caenorhabditis elegans
Exon98741   159   III: 8760931-8761089 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:PAR2.3b.1 8756990 8761089 -1

1 Sequence

Length
2336

1 Sequence Ontology Term

Identifier Name Description
transcript