WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:PAR2.3a.1 Sequence Name  PAR2.3a.1
Length (nt)  2053   Chromosome Location  III: 8756995-8761090
Chromosome . Primary Identifier  III Chromosome Location . Start  8756995
Chromosome Location . End  8761090 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
PAR2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019801 aak-1 PAR2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PAR2.3a PAR2.3a 1770   III: 8757236-8757361

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:PAR2.3a.1 8756995 8761090 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98727   367   III: 8756995-8757361 Caenorhabditis elegans
Exon98728   89   III: 8757419-8757507 Caenorhabditis elegans
Exon98730   135   III: 8757983-8758117 Caenorhabditis elegans
Exon98732   300   III: 8758465-8758764 Caenorhabditis elegans
Exon98734   205   III: 8758813-8759017 Caenorhabditis elegans
Exon98736   209   III: 8759445-8759653 Caenorhabditis elegans
Exon98738   262   III: 8759702-8759963 Caenorhabditis elegans
Exon98740   326   III: 8760243-8760568 Caenorhabditis elegans
Exon98742   160   III: 8760931-8761090 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:PAR2.3a.1 8756995 8761090 -1

1 Sequence

Length
2053

1 Sequence Ontology Term

Identifier Name Description
transcript