WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:PAR2.4a.1 Sequence Name  PAR2.4a.1
Length (nt)  2837   Chromosome Location  III: 8763539-8767335
Chromosome . Primary Identifier  III Chromosome Location . Start  8763539
Chromosome Location . End  8767335 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
PAR2.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003253 mig-22 PAR2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PAR2.4a PAR2.4a 2415   III: 8763891-8764017

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:PAR2.4a.1 8763539 8767335 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98750   479   III: 8763539-8764017 Caenorhabditis elegans
Exon98754   710   III: 8764075-8764784 Caenorhabditis elegans
Exon98761   153   III: 8765143-8765295 Caenorhabditis elegans
Exon98768   706   III: 8765376-8766081 Caenorhabditis elegans
Exon98775   113   III: 8766149-8766261 Caenorhabditis elegans
Exon98782   87   III: 8766309-8766395 Caenorhabditis elegans
Exon98790   300   III: 8766641-8766940 Caenorhabditis elegans
Exon98795   228   III: 8766991-8767218 Caenorhabditis elegans
Exon98800   61   III: 8767275-8767335 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:PAR2.4a.1 8763539 8767335 -1

1 Sequence

Length
2837

1 Sequence Ontology Term

Identifier Name Description
transcript