WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:PAR2.4b.1 Sequence Name  PAR2.4b.1
Length (nt)  2877   Chromosome Location  III: 8763538-8767341
Chromosome . Primary Identifier  III Chromosome Location . Start  8763538
Chromosome Location . End  8767341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
PAR2.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003253 mig-22 PAR2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PAR2.4b PAR2.4b 1821   III: 8763891-8764017

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:PAR2.4b.1 8763538 8767341 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98746   480   III: 8763538-8764017 Caenorhabditis elegans
Exon98754   710   III: 8764075-8764784 Caenorhabditis elegans
Exon98761   153   III: 8765143-8765295 Caenorhabditis elegans
Exon98768   706   III: 8765376-8766081 Caenorhabditis elegans
Exon98775   113   III: 8766149-8766261 Caenorhabditis elegans
Exon98782   87   III: 8766309-8766395 Caenorhabditis elegans
Exon98786   33   III: 8766524-8766556 Caenorhabditis elegans
Exon98790   300   III: 8766641-8766940 Caenorhabditis elegans
Exon98794   228   III: 8766991-8767218 Caenorhabditis elegans
Exon98799   67   III: 8767275-8767341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:PAR2.4b.1 8763538 8767341 -1

1 Sequence

Length
2877

1 Sequence Ontology Term

Identifier Name Description
transcript