WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:PAR2.4a.2 Sequence Name  PAR2.4a.2
Length (nt)  2637   Chromosome Location  III: 8763291-8767342
Chromosome . Primary Identifier  III Chromosome Location . Start  8763291
Chromosome Location . End  8767342 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
PAR2.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003253 mig-22 PAR2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PAR2.4a PAR2.4a 2415   III: 8763891-8764017

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:PAR2.4a.2 8763291 8767342 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98777   14   III: 8763291-8763304 Caenorhabditis elegans
Exon98783   258   III: 8763760-8764017 Caenorhabditis elegans
Exon98785   710   III: 8764075-8764784 Caenorhabditis elegans
Exon98792   153   III: 8765143-8765295 Caenorhabditis elegans
Exon98799   706   III: 8765376-8766081 Caenorhabditis elegans
Exon98806   113   III: 8766149-8766261 Caenorhabditis elegans
Exon98813   87   III: 8766309-8766395 Caenorhabditis elegans
Exon98821   300   III: 8766641-8766940 Caenorhabditis elegans
Exon98826   228   III: 8766991-8767218 Caenorhabditis elegans
Exon98833   68   III: 8767275-8767342 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:PAR2.4a.2 8763291 8767342 -1

1 Sequence

Length
2637

1 Sequence Ontology Term

Identifier Name Description
transcript