WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54F2.5 Sequence Name  F54F2.5
Length (nt)  1749   Chromosome Location  III: 8787266-8787339
Chromosome . Primary Identifier  III Chromosome Location . Start  8787266
Chromosome Location . End  8787339
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F2.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25004 ZTF-1 66.8 582 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00048368
WBRNAi00015651
WBRNAi00005529
WBRNAi00032811
WBRNAi00114760
WBRNAi00077109

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54F2.5 8787266 8787339 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018833 ztf-1 F54F2.5 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54F2.5 8787266 8787339 -1
CDS:F54F2.5 8787396 8787500 -1
CDS:F54F2.5 8787568 8787744 -1
CDS:F54F2.5 8788155 8788227 -1
CDS:F54F2.5 8788995 8789159 -1
CDS:F54F2.5 8789669 8789859 -1
CDS:F54F2.5 8789917 8789997 -1
CDS:F54F2.5 8790046 8790095 -1
CDS:F54F2.5 8790569 8790694 -1
CDS:F54F2.5 8790840 8790931 -1
CDS:F54F2.5 8790980 8791093 -1
CDS:F54F2.5 8791404 8791488 -1
CDS:F54F2.5 8791538 8791671 -1
CDS:F54F2.5 8792057 8792338 -1

1 Sequence

Length
1749

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54F2.5.1 F54F2.5.1 1936   III: 8787092-8792351