WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54F2.9.1 Sequence Name  F54F2.9.1
Length (nt)  1375   Chromosome Location  III: 8825226-8827228
Chromosome . Primary Identifier  III Chromosome Location . Start  8825226
Chromosome Location . End  8827228 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F2.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018836 F54F2.9 F54F2.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54F2.9 F54F2.9 1245   III: 8825355-8825463

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54F2.9.1 8825226 8827228 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99010   238   III: 8825226-8825463 Caenorhabditis elegans
Exon99011   310   III: 8825607-8825916 Caenorhabditis elegans
Exon99012   485   III: 8825977-8826461 Caenorhabditis elegans
Exon99013   342   III: 8826887-8827228 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54F2.9.1 8825226 8827228 -1

1 Sequence

Length
1375

1 Sequence Ontology Term

Identifier Name Description
transcript