WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44E2.7c.1 Sequence Name  F44E2.7c.1
Length (nt)  1240   Chromosome Location  III: 8846100-8847612
Chromosome . Primary Identifier  III Chromosome Location . Start  8846100
Chromosome Location . End  8847612 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44E2.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018420 F44E2.7 F44E2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44E2.7c F44E2.7c 1236   III: 8846100-8846385

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44E2.7c.1 8846100 8847612 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99048   286   III: 8846100-8846385 Caenorhabditis elegans
Exon99051   193   III: 8846443-8846635 Caenorhabditis elegans
Exon99055   99   III: 8846685-8846783 Caenorhabditis elegans
Exon99060   582   III: 8846828-8847409 Caenorhabditis elegans
Exon99061   80   III: 8847533-8847612 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44E2.7c.1 8846100 8847612 -1

1 Sequence

Length
1240

1 Sequence Ontology Term

Identifier Name Description
transcript