WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK637.1.1 Sequence Name  ZK637.1.1
Length (nt)  1879   Chromosome Location  III: 8882707-8885482
Chromosome . Primary Identifier  III Chromosome Location . Start  8882707
Chromosome Location . End  8885482 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK637.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014021 svop-1 ZK637.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK637.1 ZK637.1 1563   III: 8883014-8883025

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK637.1.1 8882707 8885482 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99137   319   III: 8882707-8883025 Caenorhabditis elegans
Exon99139   114   III: 8883074-8883187 Caenorhabditis elegans
Exon99141   172   III: 8883317-8883488 Caenorhabditis elegans
Exon99143   500   III: 8883603-8884102 Caenorhabditis elegans
Exon99145   190   III: 8884202-8884391 Caenorhabditis elegans
Exon99147   125   III: 8884450-8884574 Caenorhabditis elegans
Exon99149   87   III: 8884624-8884710 Caenorhabditis elegans
Exon99151   84   III: 8884751-8884834 Caenorhabditis elegans
Exon99153   187   III: 8885152-8885338 Caenorhabditis elegans
Exon99155   101   III: 8885382-8885482 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK637.1.1 8882707 8885482 -1

1 Sequence

Length
1879

1 Sequence Ontology Term

Identifier Name Description
transcript