WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK637.7a.1 Sequence Name  ZK637.7a.1
Length (nt)  2293   Chromosome Location  III: 8900237-8904131
Chromosome . Primary Identifier  III Chromosome Location . Start  8900237
Chromosome Location . End  8904131 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK637.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002998 lin-9 ZK637.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK637.7a ZK637.7a 1929   III: 8900595-8900792

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK637.7a.1 8900237 8904131 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99150   556   III: 8900237-8900792 Caenorhabditis elegans
Exon99152   150   III: 8901548-8901697 Caenorhabditis elegans
Exon99154   105   III: 8901744-8901848 Caenorhabditis elegans
Exon99156   411   III: 8901927-8902337 Caenorhabditis elegans
Exon99158   159   III: 8902813-8902971 Caenorhabditis elegans
Exon99160   597   III: 8903016-8903612 Caenorhabditis elegans
Exon99162   133   III: 8903659-8903791 Caenorhabditis elegans
Exon99164   119   III: 8903841-8903959 Caenorhabditis elegans
Exon99166   63   III: 8904069-8904131 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK637.7a.1 8900237 8904131 -1

1 Sequence

Length
2293

1 Sequence Ontology Term

Identifier Name Description
transcript