WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK643.1c.1 Sequence Name  ZK643.1c.1
Length (nt)  1169   Chromosome Location  III: 8930023-8936739
Chromosome . Primary Identifier  III Chromosome Location . Start  8930023
Chromosome Location . End  8936739 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK643.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014033 arrd-15 ZK643.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK643.1c ZK643.1c 1074   III: 8930036-8930080

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK643.1c.1 8930023 8936739 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99256   58   III: 8930023-8930080 Caenorhabditis elegans
Exon99260   192   III: 8934235-8934426 Caenorhabditis elegans
Exon99265   174   III: 8934480-8934653 Caenorhabditis elegans
Exon99269   99   III: 8934770-8934868 Caenorhabditis elegans
Exon99273   84   III: 8934917-8935000 Caenorhabditis elegans
Exon99277   186   III: 8935043-8935228 Caenorhabditis elegans
Exon99281   124   III: 8935275-8935398 Caenorhabditis elegans
Exon99283   252   III: 8936488-8936739 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK643.1c.1 8930023 8936739 1

1 Sequence

Length
1169

1 Sequence Ontology Term

Identifier Name Description
transcript