WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK643.3b.1 Sequence Name  ZK643.3b.1
Length (nt)  1855   Chromosome Location  III: 8944686-8952953
Chromosome . Primary Identifier  III Chromosome Location . Start  8944686
Chromosome Location . End  8952953 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK643.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014035 dhrr-1 ZK643.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK643.3b ZK643.3b 1569   III: 8944815-8944975

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK643.3b.1 8944686 8952953 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99288   290   III: 8944686-8944975 Caenorhabditis elegans
Exon99289   126   III: 8945799-8945924 Caenorhabditis elegans
Exon99290   122   III: 8949586-8949707 Caenorhabditis elegans
Exon99291   147   III: 8949755-8949901 Caenorhabditis elegans
Exon99292   95   III: 8950124-8950218 Caenorhabditis elegans
Exon99293   92   III: 8950264-8950355 Caenorhabditis elegans
Exon99294   142   III: 8950652-8950793 Caenorhabditis elegans
Exon99295   157   III: 8950918-8951074 Caenorhabditis elegans
Exon99296   223   III: 8951461-8951683 Caenorhabditis elegans
Exon99297   121   III: 8952116-8952236 Caenorhabditis elegans
Exon99298   340   III: 8952614-8952953 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK643.3b.1 8944686 8952953 1

1 Sequence

Length
1855

1 Sequence Ontology Term

Identifier Name Description
transcript