WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK643.8a.1 Sequence Name  ZK643.8a.1
Length (nt)  2465   Chromosome Location  III: 8962293-8965707
Chromosome . Primary Identifier  III Chromosome Location . Start  8962293
Chromosome Location . End  8965707 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK643.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001734 grl-25 ZK643.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK643.8a ZK643.8a 2325   III: 8962295-8962388

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK643.8a.1 8962293 8965707 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99312   96   III: 8962293-8962388 Caenorhabditis elegans
Exon99315   618   III: 8962438-8963055 Caenorhabditis elegans
Exon99319   93   III: 8963106-8963198 Caenorhabditis elegans
Exon99321   173   III: 8963244-8963416 Caenorhabditis elegans
Exon99323   1161   III: 8964169-8965329 Caenorhabditis elegans
Exon99327   324   III: 8965384-8965707 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK643.8a.1 8962293 8965707 1

1 Sequence

Length
2465

1 Sequence Ontology Term

Identifier Name Description
transcript