WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08D7.4a.1 Sequence Name  R08D7.4a.1
Length (nt)  1394   Chromosome Location  III: 8971892-8973671
Chromosome . Primary Identifier  III Chromosome Location . Start  8971892
Chromosome Location . End  8973671 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08D7.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011144 R08D7.4 R08D7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08D7.4a R08D7.4a 1116   III: 8972221-8972634

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08D7.4a.1 8971892 8973671 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99344   195   III: 8971892-8972086 Caenorhabditis elegans
Exon99349   496   III: 8972139-8972634 Caenorhabditis elegans
Exon99353   301   III: 8972688-8972988 Caenorhabditis elegans
Exon99357   102   III: 8973060-8973161 Caenorhabditis elegans
Exon99360   135   III: 8973317-8973451 Caenorhabditis elegans
Exon99364   165   III: 8973507-8973671 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08D7.4a.1 8971892 8973671 1

1 Sequence

Length
1394

1 Sequence Ontology Term

Identifier Name Description
transcript