WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08D7.7.2 Sequence Name  R08D7.7.2
Length (nt)  2587   Chromosome Location  III: 8990052-8994819
Chromosome . Primary Identifier  III Chromosome Location . Start  8990052
Chromosome Location . End  8994819 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08D7.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011147 R08D7.7 R08D7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08D7.7 R08D7.7 1569   III: 8992225-8992266

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08D7.7.2 8990052 8994819 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99392   853   III: 8990052-8990904 Caenorhabditis elegans
Exon99393   62   III: 8992205-8992266 Caenorhabditis elegans
Exon99396   89   III: 8992312-8992400 Caenorhabditis elegans
Exon99398   229   III: 8992447-8992675 Caenorhabditis elegans
Exon99400   195   III: 8992808-8993002 Caenorhabditis elegans
Exon99402   102   III: 8993065-8993166 Caenorhabditis elegans
Exon99404   90   III: 8993217-8993306 Caenorhabditis elegans
Exon99406   82   III: 8993353-8993434 Caenorhabditis elegans
Exon99408   157   III: 8993561-8993717 Caenorhabditis elegans
Exon99410   211   III: 8993997-8994207 Caenorhabditis elegans
Exon99412   223   III: 8994258-8994480 Caenorhabditis elegans
Exon99414   294   III: 8994526-8994819 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08D7.7.2 8990052 8994819 1

1 Sequence

Length
2587

1 Sequence Ontology Term

Identifier Name Description
transcript