WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59B2.2.1 Sequence Name  F59B2.2.1
Length (nt)  1732   Chromosome Location  III: 8994645-8996786
Chromosome . Primary Identifier  III Chromosome Location . Start  8994645
Chromosome Location . End  8996786 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59B2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010307 skat-1 F59B2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59B2.2 F59B2.2 1383   III: 8994988-8995128

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59B2.2.1 8994645 8996786 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99415   484   III: 8994645-8995128 Caenorhabditis elegans
Exon99416   586   III: 8995180-8995765 Caenorhabditis elegans
Exon99417   267   III: 8995833-8996099 Caenorhabditis elegans
Exon99418   185   III: 8996148-8996332 Caenorhabditis elegans
Exon99419   91   III: 8996386-8996476 Caenorhabditis elegans
Exon99420   119   III: 8996668-8996786 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59B2.2.1 8994645 8996786 -1

1 Sequence

Length
1732

1 Sequence Ontology Term

Identifier Name Description
transcript