WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08D7.7.1 Sequence Name  R08D7.7.1
Length (nt)  1661   Chromosome Location  III: 8992205-8994746
Chromosome . Primary Identifier  III Chromosome Location . Start  8992205
Chromosome Location . End  8994746 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08D7.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011147 R08D7.7 R08D7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08D7.7 R08D7.7 1569   III: 8992225-8992266

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08D7.7.1 8992205 8994746 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99427   62   III: 8992205-8992266 Caenorhabditis elegans
Exon99428   89   III: 8992312-8992400 Caenorhabditis elegans
Exon99430   229   III: 8992447-8992675 Caenorhabditis elegans
Exon99432   195   III: 8992808-8993002 Caenorhabditis elegans
Exon99434   102   III: 8993065-8993166 Caenorhabditis elegans
Exon99436   90   III: 8993217-8993306 Caenorhabditis elegans
Exon99438   82   III: 8993353-8993434 Caenorhabditis elegans
Exon99440   157   III: 8993561-8993717 Caenorhabditis elegans
Exon99442   211   III: 8993997-8994207 Caenorhabditis elegans
Exon99444   223   III: 8994258-8994480 Caenorhabditis elegans
Exon99446   221   III: 8994526-8994746 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08D7.7.1 8992205 8994746 1

1 Sequence

Length
1661

1 Sequence Ontology Term

Identifier Name Description
transcript