WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R107.1a.1 Sequence Name  R107.1a.1
Length (nt)  1703   Chromosome Location  III: 9038779-9041450
Chromosome . Primary Identifier  III Chromosome Location . Start  9038779
Chromosome Location . End  9041450 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R107.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003518 nac-2 R107.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R107.1a R107.1a 1656   III: 9038826-9038972

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R107.1a.1 9038779 9041450 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99510   194   III: 9038779-9038972 Caenorhabditis elegans
Exon99511   138   III: 9039020-9039157 Caenorhabditis elegans
Exon99513   89   III: 9039280-9039368 Caenorhabditis elegans
Exon99515   76   III: 9039459-9039534 Caenorhabditis elegans
Exon99517   292   III: 9039581-9039872 Caenorhabditis elegans
Exon99519   125   III: 9039947-9040071 Caenorhabditis elegans
Exon99521   103   III: 9040121-9040223 Caenorhabditis elegans
Exon99523   294   III: 9040501-9040794 Caenorhabditis elegans
Exon99525   36   III: 9040841-9040876 Caenorhabditis elegans
Exon99527   116   III: 9040973-9041088 Caenorhabditis elegans
Exon99529   150   III: 9041157-9041306 Caenorhabditis elegans
Exon99531   90   III: 9041361-9041450 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R107.1a.1 9038779 9041450 -1

1 Sequence

Length
1703

1 Sequence Ontology Term

Identifier Name Description
transcript