WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R107.2.1 Sequence Name  R107.2.1
Length (nt)  998   Chromosome Location  III: 9043886-9045938
Chromosome . Primary Identifier  III Chromosome Location . Start  9043886
Chromosome Location . End  9045938 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R107.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011298 R107.2 R107.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R107.2 R107.2 924   III: 9043954-9044161

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R107.2.1 9043886 9045938 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99534   276   III: 9043886-9044161 Caenorhabditis elegans
Exon99535   97   III: 9044211-9044307 Caenorhabditis elegans
Exon99536   244   III: 9044794-9045037 Caenorhabditis elegans
Exon99537   324   III: 9045080-9045403 Caenorhabditis elegans
Exon99538   57   III: 9045882-9045938 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R107.2.1 9043886 9045938 -1

1 Sequence

Length
998

1 Sequence Ontology Term

Identifier Name Description
transcript