WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R107.1b.1 Sequence Name  R107.1b.1
Length (nt)  1956   Chromosome Location  III: 9038779-9043300
Chromosome . Primary Identifier  III Chromosome Location . Start  9038779
Chromosome Location . End  9043300 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R107.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003518 nac-2 R107.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R107.1b R107.1b 1758   III: 9038826-9038972

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R107.1b.1 9038779 9043300 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99543   194   III: 9038779-9038972 Caenorhabditis elegans
Exon99545   138   III: 9039020-9039157 Caenorhabditis elegans
Exon99547   89   III: 9039280-9039368 Caenorhabditis elegans
Exon99549   76   III: 9039459-9039534 Caenorhabditis elegans
Exon99551   292   III: 9039581-9039872 Caenorhabditis elegans
Exon99553   125   III: 9039947-9040071 Caenorhabditis elegans
Exon99555   103   III: 9040121-9040223 Caenorhabditis elegans
Exon99557   294   III: 9040501-9040794 Caenorhabditis elegans
Exon99559   36   III: 9040841-9040876 Caenorhabditis elegans
Exon99561   116   III: 9040973-9041088 Caenorhabditis elegans
Exon99563   150   III: 9041157-9041306 Caenorhabditis elegans
Exon99565   113   III: 9041361-9041473 Caenorhabditis elegans
Exon99566   230   III: 9043071-9043300 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R107.1b.1 9038779 9043300 -1

1 Sequence

Length
1956

1 Sequence Ontology Term

Identifier Name Description
transcript