WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R107.4b Sequence Name  R107.4b
Length (nt)  2463   Chromosome Location  III: 9046355-9046411
Chromosome . Primary Identifier  III Chromosome Location . Start  9046355
Chromosome Location . End  9046411
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R107.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31818 IKKE-1, isoform b 93.2 820 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00002155
WBRNAi00051669
WBRNAi00008232
WBRNAi00017684
WBRNAi00005028
WBRNAi00082540
WBRNAi00113649
WBRNAi00023556
WBRNAi00024087
WBRNAi00023289

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R107.4b 9046355 9046411 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011299 ikke-1 R107.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:R107.4b 9046355 9046411 -1
CDS:R107.4b 9046498 9046585 -1
CDS:R107.4b 9047676 9047743 -1
CDS:R107.4b 9047843 9048646 -1
CDS:R107.4b 9049104 9049946 -1
CDS:R107.4b 9050039 9050241 -1
CDS:R107.4b 9050293 9050692 -1

1 Sequence

Length
2463

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R107.4b.1 R107.4b.1 2764   III: 9046055-9050693