WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R107.5b.1 Sequence Name  R107.5b.1
Length (nt)  992   Chromosome Location  III: 9051596-9053790
Chromosome . Primary Identifier  III Chromosome Location . Start  9051596
Chromosome Location . End  9053790 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R107.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011300 R107.5 R107.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R107.5b R107.5b 825   III: 9051757-9052123

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R107.5b.1 9051596 9053790 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99572   528   III: 9051596-9052123 Caenorhabditis elegans
Exon99575   201   III: 9052177-9052377 Caenorhabditis elegans
Exon99577   101   III: 9052422-9052522 Caenorhabditis elegans
Exon99579   162   III: 9053629-9053790 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R107.5b.1 9051596 9053790 -1

1 Sequence

Length
992

1 Sequence Ontology Term

Identifier Name Description
transcript