WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02A9.10.1 Sequence Name  F02A9.10.1
Length (nt)  2207   Chromosome Location  III: 9086744-9089375
Chromosome . Primary Identifier  III Chromosome Location . Start  9086744
Chromosome Location . End  9089375 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02A9.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00303021 mccc-2 F02A9.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02A9.10 F02A9.10 1827   III: 9087122-9087196

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02A9.10.1 9086744 9089375 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99632   453   III: 9086744-9087196 Caenorhabditis elegans
Exon99633   238   III: 9087242-9087479 Caenorhabditis elegans
Exon99634   155   III: 9087525-9087679 Caenorhabditis elegans
Exon99635   305   III: 9087731-9088035 Caenorhabditis elegans
Exon99636   598   III: 9088091-9088688 Caenorhabditis elegans
Exon99637   292   III: 9088735-9089026 Caenorhabditis elegans
Exon99638   109   III: 9089162-9089270 Caenorhabditis elegans
Exon99640   57   III: 9089319-9089375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02A9.10.1 9086744 9089375 -1

1 Sequence

Length
2207

1 Sequence Ontology Term

Identifier Name Description
transcript