WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK512.3.1 Sequence Name  ZK512.3.1
Length (nt)  4370   Chromosome Location  III: 9119556-9125162
Chromosome . Primary Identifier  III Chromosome Location . Start  9119556
Chromosome Location . End  9125162 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK512.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK512.3 ZK512.3 4257   III: 9119559-9120153

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK512.3.1 9119556 9125162 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99696   598   III: 9119556-9120153 Caenorhabditis elegans
Exon99697   117   III: 9120198-9120314 Caenorhabditis elegans
Exon99698   157   III: 9120572-9120728 Caenorhabditis elegans
Exon99699   718   III: 9120777-9121494 Caenorhabditis elegans
Exon99700   84   III: 9121539-9121622 Caenorhabditis elegans
Exon99701   93   III: 9121720-9121812 Caenorhabditis elegans
Exon99702   266   III: 9121858-9122123 Caenorhabditis elegans
Exon99703   169   III: 9122170-9122338 Caenorhabditis elegans
Exon99704   117   III: 9122395-9122511 Caenorhabditis elegans
Exon99705   222   III: 9122560-9122781 Caenorhabditis elegans
Exon99706   298   III: 9122965-9123262 Caenorhabditis elegans
Exon99707   262   III: 9123308-9123569 Caenorhabditis elegans
Exon99708   307   III: 9123797-9124103 Caenorhabditis elegans
Exon99709   567   III: 9124153-9124719 Caenorhabditis elegans
Exon99710   395   III: 9124768-9125162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK512.3.1 9119556 9125162 1

1 Sequence

Length
4370

1 Sequence Ontology Term

Identifier Name Description
transcript