WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK512.6a.1 Sequence Name  ZK512.6a.1
Length (nt)  2218   Chromosome Location  III: 9136887-9141827
Chromosome . Primary Identifier  III Chromosome Location . Start  9136887
Chromosome Location . End  9141827 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK512.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001135 eat-4 ZK512.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK512.6a ZK512.6a 1731   III: 9136916-9136977

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK512.6a.1 9136887 9141827 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99777   91   III: 9136887-9136977 Caenorhabditis elegans
Exon99778   51   III: 9137127-9137177 Caenorhabditis elegans
Exon99780   214   III: 9137331-9137544 Caenorhabditis elegans
Exon99782   119   III: 9137589-9137707 Caenorhabditis elegans
Exon99784   118   III: 9137756-9137873 Caenorhabditis elegans
Exon99786   175   III: 9137917-9138091 Caenorhabditis elegans
Exon99790   137   III: 9138928-9139064 Caenorhabditis elegans
Exon99792   58   III: 9139115-9139172 Caenorhabditis elegans
Exon99794   92   III: 9139917-9140008 Caenorhabditis elegans
Exon99796   244   III: 9140310-9140553 Caenorhabditis elegans
Exon99798   375   III: 9140856-9141230 Caenorhabditis elegans
Exon99801   544   III: 9141284-9141827 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK512.6a.1 9136887 9141827 1

1 Sequence

Length
2218

1 Sequence Ontology Term

Identifier Name Description
transcript