WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54G8.1.1 Sequence Name  F54G8.1.1
Length (nt)  1271   Chromosome Location  III: 9155066-9157192
Chromosome . Primary Identifier  III Chromosome Location . Start  9155066
Chromosome Location . End  9157192 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54G8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010074 irld-34 F54G8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54G8.1 F54G8.1 1194   III: 9155116-9155176

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54G8.1.1 9155066 9157192 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99812   111   III: 9155066-9155176 Caenorhabditis elegans
Exon99813   104   III: 9155568-9155671 Caenorhabditis elegans
Exon99814   142   III: 9155718-9155859 Caenorhabditis elegans
Exon99815   71   III: 9155927-9155997 Caenorhabditis elegans
Exon99816   139   III: 9156045-9156183 Caenorhabditis elegans
Exon99817   130   III: 9156226-9156355 Caenorhabditis elegans
Exon99818   101   III: 9156399-9156499 Caenorhabditis elegans
Exon99819   210   III: 9156625-9156834 Caenorhabditis elegans
Exon99820   122   III: 9156885-9157006 Caenorhabditis elegans
Exon99821   141   III: 9157052-9157192 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54G8.1.1 9155066 9157192 1

1 Sequence

Length
1271

1 Sequence Ontology Term

Identifier Name Description
transcript