WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC84.4.1 Sequence Name  ZC84.4.1
Length (nt)  1309   Chromosome Location  III: 9208236-9215467
Chromosome . Primary Identifier  III Chromosome Location . Start  9208236
Chromosome Location . End  9215467 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC84.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013848 npr-29 ZC84.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC84.4 ZC84.4 1188   III: 9208325-9208472

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC84.4.1 9208236 9215467 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99928   237   III: 9208236-9208472 Caenorhabditis elegans
Exon99929   181   III: 9208632-9208812 Caenorhabditis elegans
Exon99930   131   III: 9208857-9208987 Caenorhabditis elegans
Exon99931   60   III: 9209198-9209257 Caenorhabditis elegans
Exon99932   73   III: 9209307-9209379 Caenorhabditis elegans
Exon99933   157   III: 9209430-9209586 Caenorhabditis elegans
Exon99934   97   III: 9209651-9209747 Caenorhabditis elegans
Exon99935   94   III: 9209798-9209891 Caenorhabditis elegans
Exon99936   178   III: 9209935-9210112 Caenorhabditis elegans
Exon99937   101   III: 9215367-9215467 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC84.4.1 9208236 9215467 -1

1 Sequence

Length
1309

1 Sequence Ontology Term

Identifier Name Description
transcript