WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23G5.1.1 Sequence Name  T23G5.1.1
Length (nt)  2515   Chromosome Location  III: 9225375-9228250
Chromosome . Primary Identifier  III Chromosome Location . Start  9225375
Chromosome Location . End  9228250 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23G5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004391 rnr-1 T23G5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23G5.1 T23G5.1 2367   III: 9225521-9226100

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23G5.1.1 9225375 9228250 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99939   726   III: 9225375-9226100 Caenorhabditis elegans
Exon99940   651   III: 9226149-9226799 Caenorhabditis elegans
Exon99944   731   III: 9227022-9227752 Caenorhabditis elegans
Exon99946   279   III: 9227800-9228078 Caenorhabditis elegans
Exon99948   128   III: 9228123-9228250 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23G5.1.1 9225375 9228250 -1

1 Sequence

Length
2515

1 Sequence Ontology Term

Identifier Name Description
transcript