WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M01A8.2a Sequence Name  M01A8.2a
Length (nt)  2814   Chromosome Location  III: 9260542-9260774
Chromosome . Primary Identifier  III Chromosome Location . Start  9260542
Chromosome Location . End  9260774
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01A8.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33535 CLIP-1, isoform a 104.7 937 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00034334
WBRNAi00106245
WBRNAi00050719
WBRNAi00006302

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M01A8.2a 9260542 9260774 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010796 clip-1 M01A8.2 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:M01A8.2a 9260542 9260774 -1
CDS:M01A8.2a 9260827 9260930 -1
CDS:M01A8.2a 9261059 9261229 -1
CDS:M01A8.2a 9261286 9261395 -1
CDS:M01A8.2a 9261445 9261744 -1
CDS:M01A8.2a 9262129 9262184 -1
CDS:M01A8.2a 9262834 9262935 -1
CDS:M01A8.2a 9262987 9263109 -1
CDS:M01A8.2a 9263564 9263785 -1
CDS:M01A8.2a 9263845 9263991 -1
CDS:M01A8.2a 9264185 9264290 -1
CDS:M01A8.2a 9264864 9265007 -1
CDS:M01A8.2a 9265458 9265570 -1
CDS:M01A8.2a 9265616 9265819 -1
CDS:M01A8.2a 9265981 9266074 -1
CDS:M01A8.2a 9266124 9266198 -1
CDS:M01A8.2a 9267416 9267619 -1
CDS:M01A8.2a 9267824 9267933 -1
CDS:M01A8.2a 9267976 9268147 -1
CDS:M01A8.2a 9269019 9269042 -1

1 Sequence

Length
2814

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M01A8.2a.1 M01A8.2a.1 3201   III: 9260175-9269062