WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04H4.2b.1 Sequence Name  K04H4.2b.1
Length (nt)  2902   Chromosome Location  III: 9347768-9355462
Chromosome . Primary Identifier  III Chromosome Location . Start  9347768
Chromosome Location . End  9355462 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04H4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010573 chtb-1 K04H4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04H4.2b K04H4.2b 2367   III: 9348186-9348259

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04H4.2b.1 9347768 9355462 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100197   492   III: 9347768-9348259 Caenorhabditis elegans
Exon100201   141   III: 9348483-9348623 Caenorhabditis elegans
Exon100203   192   III: 9348677-9348868 Caenorhabditis elegans
Exon100205   147   III: 9348924-9349070 Caenorhabditis elegans
Exon100208   204   III: 9349170-9349373 Caenorhabditis elegans
Exon100211   684   III: 9349452-9350135 Caenorhabditis elegans
Exon100214   117   III: 9350182-9350298 Caenorhabditis elegans
Exon100217   129   III: 9350353-9350481 Caenorhabditis elegans
Exon100220   60   III: 9350530-9350589 Caenorhabditis elegans
Exon100225   126   III: 9351241-9351366 Caenorhabditis elegans
Exon100233   98   III: 9353527-9353624 Caenorhabditis elegans
Exon100236   103   III: 9353669-9353771 Caenorhabditis elegans
Exon100240   140   III: 9354663-9354802 Caenorhabditis elegans
Exon100243   118   III: 9354850-9354967 Caenorhabditis elegans
Exon100247   151   III: 9355312-9355462 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04H4.2b.1 9347768 9355462 -1

1 Sequence

Length
2902

1 Sequence Ontology Term

Identifier Name Description
transcript