WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04H4.6a.1 Sequence Name  K04H4.6a.1
Length (nt)  1288   Chromosome Location  III: 9367273-9369604
Chromosome . Primary Identifier  III Chromosome Location . Start  9367273
Chromosome Location . End  9369604 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04H4.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000799 crn-6 K04H4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04H4.6a K04H4.6a 1122   III: 9367273-9367364

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04H4.6a.1 9367273 9369604 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100267   92   III: 9367273-9367364 Caenorhabditis elegans
Exon100268   103   III: 9367959-9368061 Caenorhabditis elegans
Exon100270   84   III: 9368109-9368192 Caenorhabditis elegans
Exon100272   229   III: 9368239-9368467 Caenorhabditis elegans
Exon100274   110   III: 9368516-9368625 Caenorhabditis elegans
Exon100276   88   III: 9368766-9368853 Caenorhabditis elegans
Exon100278   122   III: 9368903-9369024 Caenorhabditis elegans
Exon100280   144   III: 9369093-9369236 Caenorhabditis elegans
Exon100283   316   III: 9369289-9369604 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04H4.6a.1 9367273 9369604 1

1 Sequence

Length
1288

1 Sequence Ontology Term

Identifier Name Description
transcript