WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38C10.3.1 Sequence Name  C38C10.3.1
Length (nt)  1001   Chromosome Location  III: 9384123-9385643
Chromosome . Primary Identifier  III Chromosome Location . Start  9384123
Chromosome Location . End  9385643 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38C10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008001 C38C10.3 C38C10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38C10.3 C38C10.3 906   III: 9384172-9384355

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38C10.3.1 9384123 9385643 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100286   233   III: 9384123-9384355 Caenorhabditis elegans
Exon100287   87   III: 9384407-9384493 Caenorhabditis elegans
Exon100288   517   III: 9384538-9385054 Caenorhabditis elegans
Exon100289   89   III: 9385432-9385520 Caenorhabditis elegans
Exon100290   75   III: 9385569-9385643 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38C10.3.1 9384123 9385643 -1

1 Sequence

Length
1001

1 Sequence Ontology Term

Identifier Name Description
transcript