WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38C10.6.1 Sequence Name  C38C10.6.1
Length (nt)  390   Chromosome Location  III: 9400531-9401136
Chromosome . Primary Identifier  III Chromosome Location . Start  9400531
Chromosome Location . End  9401136 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38C10.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008002 nlp-48 C38C10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38C10.6 C38C10.6 207   III: 9400645-9400678

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38C10.6.1 9400531 9401136 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100330   148   III: 9400531-9400678 Caenorhabditis elegans
Exon100331   89   III: 9400723-9400811 Caenorhabditis elegans
Exon100332   153   III: 9400984-9401136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38C10.6.1 9400531 9401136 -1

1 Sequence

Length
390

1 Sequence Ontology Term

Identifier Name Description
transcript