WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54C8.2 Sequence Name  F54C8.2
Length (nt)  786   Chromosome Location  III: 9434074-9434165
Chromosome . Primary Identifier  III Chromosome Location . Start  9434074
Chromosome Location . End  9434165
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C8.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00188 CPAR-1 29.1 261 Caenorhabditis elegans
 

Other

37 RNAi

WormBase ID
WBRNAi00073583
WBRNAi00073585
WBRNAi00073584
WBRNAi00073586
WBRNAi00073589
WBRNAi00073588
WBRNAi00025615
WBRNAi00099803
WBRNAi00072524
WBRNAi00113542
WBRNAi00100796
WBRNAi00099197
WBRNAi00099601
WBRNAi00099399
WBRNAi00068636
WBRNAi00068637
WBRNAi00068633
WBRNAi00068634
WBRNAi00068635
WBRNAi00072526
WBRNAi00032754
WBRNAi00002614
WBRNAi00072525
WBRNAi00073587
WBRNAi00073590
WBRNAi00008843
WBRNAi00064690
WBRNAi00048260
WBRNAi00069025
WBRNAi00108682

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54C8.2 9434074 9434165 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010036 cpar-1 F54C8.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54C8.2 9434074 9434165 1
CDS:F54C8.2 9434213 9434360 1
CDS:F54C8.2 9434413 9434733 1
CDS:F54C8.2 9434782 9435006 1

1 Sequence

Length
786

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54C8.2.1 F54C8.2.1 897   III: 9434057-9435100