WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54C8.1 Sequence Name  F54C8.1
Length (nt)  897   Chromosome Location  III: 9439910-9440119
Chromosome . Primary Identifier  III Chromosome Location . Start  9439910
Chromosome Location . End  9440119
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C8.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00187 F54C8.1 32.5 298 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00048257
WBRNAi00048258
WBRNAi00048259
WBRNAi00015586
WBRNAi00006126
WBRNAi00032753
WBRNAi00032755
WBRNAi00078186
WBRNAi00102623

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54C8.1 9439910 9440119 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010035 F54C8.1 F54C8.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54C8.1 9439910 9440119 1
CDS:F54C8.1 9440166 9440630 1
CDS:F54C8.1 9440676 9440897 1

1 Sequence

Length
897

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54C8.1.1 F54C8.1.1 999   III: 9439699-9440946
Transcript:F54C8.1.2 F54C8.1.2 953   III: 9439905-9440948