WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0464.5c.1 Sequence Name  B0464.5c.1
Length (nt)  3103   Chromosome Location  III: 9456608-9463004
Chromosome . Primary Identifier  III Chromosome Location . Start  9456608
Chromosome Location . End  9463004 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0464.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004980 spk-1 B0464.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0464.5c B0464.5c 2325   III: 9456642-9456716

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0464.5c.1 9456608 9463004 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100457   109   III: 9456608-9456716 Caenorhabditis elegans
Exon100460   101   III: 9457205-9457305 Caenorhabditis elegans
Exon100466   115   III: 9459101-9459215 Caenorhabditis elegans
Exon100471   249   III: 9459269-9459517 Caenorhabditis elegans
Exon100476   309   III: 9459624-9459932 Caenorhabditis elegans
Exon100481   240   III: 9459984-9460223 Caenorhabditis elegans
Exon100483   177   III: 9460518-9460694 Caenorhabditis elegans
Exon100487   81   III: 9461066-9461146 Caenorhabditis elegans
Exon100492   723   III: 9461193-9461915 Caenorhabditis elegans
Exon100497   101   III: 9461963-9462063 Caenorhabditis elegans
Exon100502   898   III: 9462107-9463004 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0464.5c.1 9456608 9463004 1

1 Sequence

Length
3103

1 Sequence Ontology Term

Identifier Name Description
transcript