WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0464.5a.2 Sequence Name  B0464.5a.2
Length (nt)  3278   Chromosome Location  III: 9457984-9462960
Chromosome . Primary Identifier  III Chromosome Location . Start  9457984
Chromosome Location . End  9462960 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0464.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004980 spk-1 B0464.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0464.5a B0464.5a 3012   III: 9457984-9459023

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0464.5a.2 9457984 9462960 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100462   1040   III: 9457984-9459023 Caenorhabditis elegans
Exon100464   115   III: 9459101-9459215 Caenorhabditis elegans
Exon100469   249   III: 9459269-9459517 Caenorhabditis elegans
Exon100474   309   III: 9459624-9459932 Caenorhabditis elegans
Exon100479   240   III: 9459984-9460223 Caenorhabditis elegans
Exon100485   81   III: 9461066-9461146 Caenorhabditis elegans
Exon100490   723   III: 9461193-9461915 Caenorhabditis elegans
Exon100495   101   III: 9461963-9462063 Caenorhabditis elegans
Exon100501   268   III: 9462107-9462374 Caenorhabditis elegans
Exon100505   152   III: 9462809-9462960 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0464.5a.2 9457984 9462960 1

1 Sequence

Length
3278

1 Sequence Ontology Term

Identifier Name Description
transcript