WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0464.5b.1 Sequence Name  B0464.5b.1
Length (nt)  2870   Chromosome Location  III: 9456614-9463005
Chromosome . Primary Identifier  III Chromosome Location . Start  9456614
Chromosome Location . End  9463005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0464.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004980 spk-1 B0464.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0464.5b B0464.5b 2097   III: 9456642-9456716

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0464.5b.1 9456614 9463005 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100491   103   III: 9456614-9456716 Caenorhabditis elegans
Exon100492   101   III: 9457205-9457305 Caenorhabditis elegans
Exon100498   115   III: 9459101-9459215 Caenorhabditis elegans
Exon100503   249   III: 9459269-9459517 Caenorhabditis elegans
Exon100508   309   III: 9459624-9459932 Caenorhabditis elegans
Exon100513   240   III: 9459984-9460223 Caenorhabditis elegans
Exon100519   81   III: 9461066-9461146 Caenorhabditis elegans
Exon100524   723   III: 9461193-9461915 Caenorhabditis elegans
Exon100529   101   III: 9461963-9462063 Caenorhabditis elegans
Exon100532   88   III: 9462107-9462194 Caenorhabditis elegans
Exon100537   760   III: 9462246-9463005 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0464.5b.1 9456614 9463005 1

1 Sequence

Length
2870

1 Sequence Ontology Term

Identifier Name Description
transcript