WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.1b.1 Sequence Name  ZK1098.1b.1
Length (nt)  1242   Chromosome Location  III: 9523954-9525344
Chromosome . Primary Identifier  III Chromosome Location . Start  9523954
Chromosome Location . End  9525344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014218 prp-40 ZK1098.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.1b ZK1098.1b 1242   III: 9523954-9524061

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.1b.1 9523954 9525344 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100658   108   III: 9523954-9524061 Caenorhabditis elegans
Exon100660   175   III: 9524108-9524282 Caenorhabditis elegans
Exon100663   764   III: 9524330-9525093 Caenorhabditis elegans
Exon100665   195   III: 9525150-9525344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.1b.1 9523954 9525344 1

1 Sequence

Length
1242

1 Sequence Ontology Term

Identifier Name Description
transcript