WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10a.1 Sequence Name  ZK1098.10a.1
Length (nt)  4963   Chromosome Location  III: 9546258-9557450
Chromosome . Primary Identifier  III Chromosome Location . Start  9546258
Chromosome Location . End  9557450 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10a ZK1098.10a 3420   III: 9546713-9546799

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10a.1 9546258 9557450 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100713   167   III: 9546258-9546424 Caenorhabditis elegans
Exon100723   129   III: 9546671-9546799 Caenorhabditis elegans
Exon100733   280   III: 9547380-9547659 Caenorhabditis elegans
Exon100744   181   III: 9547751-9547931 Caenorhabditis elegans
Exon100756   122   III: 9548566-9548687 Caenorhabditis elegans
Exon100769   169   III: 9549172-9549340 Caenorhabditis elegans
Exon100782   44   III: 9549414-9549457 Caenorhabditis elegans
Exon100795   36   III: 9549647-9549682 Caenorhabditis elegans
Exon100809   18   III: 9550366-9550383 Caenorhabditis elegans
Exon100817   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100832   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100847   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100869   331   III: 9552582-9552912 Caenorhabditis elegans
Exon100879   400   III: 9553226-9553625 Caenorhabditis elegans
Exon100889   48   III: 9553676-9553723 Caenorhabditis elegans
Exon100901   148   III: 9554443-9554590 Caenorhabditis elegans
Exon100911   81   III: 9554638-9554718 Caenorhabditis elegans
Exon100921   68   III: 9554769-9554836 Caenorhabditis elegans
Exon100931   149   III: 9555122-9555270 Caenorhabditis elegans
Exon100941   286   III: 9555328-9555613 Caenorhabditis elegans
Exon100951   300   III: 9555664-9555963 Caenorhabditis elegans
Exon100969   1441   III: 9556010-9557450 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10a.1 9546258 9557450 1

1 Sequence

Length
4963

1 Sequence Ontology Term

Identifier Name Description
transcript